Publication from Phytopathology Lab.
- Fungal Systematics-

Treebase & Phylogeny Data Set

Ujat, A. H., Hattori, Y., Masuya, H., & Nakashima, C. (2024). Diversity of caulicolous species of the genus Diaporthe on Prunus sensu lato in Japan. Plant & Fungal Research, 7, 2-24. Diaporthe_Large_Tree_Anysia.fas

Ujat, A. H., & Nakashima, C. (2024). Piecing together the taxonomic puzzle of Sphaerulina. Fungal Systematics and Evolution, 14, 171-190. Sphaerulina_CBS_MUCC_fas

Ujat, A. H., Konishi, S., Kato, Y., Tonami, H., & Nakashima, C. (2024). Septoria cannabicola, a new species on Cannabis sativa from Japan. Mycoscience, 65(2), 92-95. Septoria_cannabicola_combine_Mycoscience65_92.fas. 

Hattori et al. (2021). Taxonomical Study of Noteworthy Species of Botryosphaeria in Japan. Mycobiology, 49(2), 122-132.Treebase_StudyID_26984_Hattori_nexus

Hattori, Y., Nakano, L., & Nakashima, C. (2023). Taxonomic re-examination of Japanese isolates of the genus Lasiodiplodia. Mycoscience, 64(2), 74-82.
AnalysisStep30736.nex

Chen et al. (2022). Genera of phytopathogenic fungi: GOPHY 4. Studies in Mycology 101: 417
TreeBase Study ID S27432
Pseudocercospora_GOPHY4_TBstudyID27432

Ujat et al. (2023). Re-Examination of Several Elsinoë Species Reported from Japan. Mycobiology, 1-17. TreeBase study ID S30162

Publications

  • Canare, Perry Lorraine D., Uy, Roselyn J., Konishi, S., Tonami, H., Alvindia, Dionisio G., & Nakashima, C. (2024). Development of Loop‐Mediated Isothermal Amplification (LAMP) Kit for the Detection of Fusarium Wilt Using SIX8 Genes. Journal of Phytopathology, 172, e13398. https://doi.org/10.1111/jph.13398

  • Hattori, Y., Masuya, H., Torii, M., Miyamoto, T., Koiwa, T., & Nakashima, C. (2024). Lectotypification, epitypification, and molecular phylogenetic confirmation of Cytospora paulowniae comb. nov., a causal pathogen of Paulownia tree canker in Japan. Mycoscience, 65(4), 156-161. https://doi.org/10.47371/mycosci.2024.02.006

  • Ujat, A. H., Hattori, Y., Masuya, H., & Nakashima, C. (2024). Diversity of caulicolous species of the genus Diaporthe on Prunus sensu lato in Japan. Plant & Fungal Research, 7, 2-24. https://doi.org/10.30546/2664-5297.2024.7.1.2 

  • Ujat, A. H., & Nakashima, C. (2024). Piecing together the taxonomic puzzle of Sphaerulina. Fungal Systematics and Evolution, 14, 171-190. https://doi.org/10.3114/fuse.2024.14.11 

  • Nakajima, K., Kuroda, K., Kawakami, T., Suzuki, H., Tsuji, T., Yokoyama, N., Tanaka, F., Konishi, S., & Nakashima, C. (2024). Monitoring of thiophanate-methyl-resistant strains of the fungi causing Fusarium head blight in Mie Prefecture, Japan. Annual Report of The Kansai Plant Protection Society, 66, 20-26. https://doi.org/10.4165/kapps.66.20

  • Groenewald, J. Z., Chen, Y. Y., Zhang, Y., Roux, J., Shin, H. D., Shivas, R. G., . . . Crous, P. W. (2024). Species diversity in Pseudocercospora. Fungal Systematics and Evolution, 13. https://doi.org/10.3114/fuse.2024.13.03 

  • Hattori, Y., Nakashima, C., & Masuya, H. (2024). Re-epitypification of Neofusicoccum laricinum. Mycoscience, 65(2), 47-48. https://doi.org/doi: 10.47371/mycosci.2023.11.003 

  • Ujat, A. H., Konishi, S., Kato, Y., Tonami, H., & Nakashima, C. (2024). Septoria cannabicola, a new species on Cannabis sativa from Japan. Mycoscience, 65(2), 92-95. https://doi.org/10.47371/mycosci.2023.1.004

  • Harishchandra, D. L., Haituk, S., Withee, P., Tamakaew, N., Nokum, N., Kanchanomai, C., . . . Cheewangkoon, R. (2023). First Molecular Phylogenetic Identification and Report of Pseudocercospora cannabina Causing Leaf Spot Disease on Cannabis sativa in Thailand. Horticulturae, 9(12). https://doi.org/10.3390/horticulturae9121261 

  • Ujat, A. H., Ono, T., Hattori, Y., & Nakashima, C. (2023). Re-Examination of Several Elsinoë Species Reported from Japan. Mycobiology, 1-17. https://doi.org/10.1080/12298093.2023.2219049

  • Hattori, Y., Nakano, L., & Nakashima, C. (2023). Taxonomic re-examination of Japanese isolates of the genus Lasiodiplodia. Mycoscience, 64(2), 74-82. https://doi.org/10.47371/mycosci.2022.12.004
  • Uy, R. J., Kayamori, M., & Nakashima, C. (2022). Characterization of Penicillium Species Isolated from Dioscorea polystachya in Hokkaido, Japan. Mycoscience 64: 11-18. https://doi.org/10.47371/mycosci.2022.11.002
  • Chen, Q., Bakhshi, M., Balci, Y., Broders, K. D., Cheewangkoon, R., Chen, S. F., . . . Crous, P. W. (2022). Genera of phytopathogenic fungi: GOPHY 4. Studies in Mycology 101: 417-564. doi:10.3114/sim.2022.101.06
  • Li, F. J., Komura, R., Nakashima, C., Shimizu, M., Kageyama, K., & Suga, H. (2022). Molecular Diagnosis of Thiophanate-Methyl-Resistant Strains of Fusarium fujikuroi in Japan. Plant Dis, PDIS07211501RE. doi:10.1094/PDIS-07-21-1501-RE
  • Ujat, A. H., Vadamalai, G., Hattori, Y., Nakashima, C., Wong, C. K. F., & Zulperi, D. (2021). Current Classification and Diversity of Fusarium Species Complex, the Causal Pathogen of Fusarium Wilt Disease of Banana in Malaysia. Agronomy, 11(10). doi:10.3390/agronomy11101955
  • Hattori, Y., Nakashima, C., Kitabata, S., Naito, K., Hieno, A., Alvarez, L. V., & Motohashi, K. (2021). Identification of the Colletotrichum species associated with mango diseases and a universal LAMP detection method for C. gloeosporioides species complex. Plant and Fungal Research, 4(1), 2-13. http://dx.doi.org/10.30546/2664-5297.2021.1.49
  • Hattori, Y., Ando, Y., Sasaki, A., Uechi, N., & Nakashima, C. (2021). Taxonomical Study of Noteworthy Species of Botryosphaeria in Japan. Mycobiology, 49(2), 122-132. doi:10.1080/12298093.2021.1895486 
    • Analysed data set in this study: Treebase Study ID 26984: See above
  • Hattori, Y., Ando, Y., & Nakashima, C. (2021). Taxonomical re-examination of the genus Neofusicoccum in Japan. Mycoscience, 62(4), 250-259. doi:10.47371/mycosci.2021.03.008
  • Crous, P. W., Lombard, L., Sandoval-Denis, M., Seifert, K. A., Schroers, H. J., Chaverri, P., . . . Thines, M. (2021). Fusarium: more than a node or a foot-shaped basal cell. Stud Mycol, 98, 100116. https://doi.org/10.1016/j.simyco.2021.100116
  • Nishikawa, J., & Nakashima, C. (2020). Japanese species of Alternaria and their species boundaries based on host range. Fungal Syst Evol, 5, 197-281. doi:10.3114/fuse.2020.05.13
  • Hattori, Y., Motohashi, K., Tanaka, K., & Nakashima, C. (2020). Taxonomical re-examination of the genus Phyllosticta—Parasitic fungi on Cupressaceae trees in Japan. Forest Pathology. https://doi.org/10.1111/efp.12630
  • Braun, U., Nakashima, C., Bakhshi, M., Zare, R., Shin, H. D., Alves, R. F., & Sposito, M. B. (2020). Taxonomy and phylogeny of cercosporoid ascomycetes on Diospyros spp. with special emphasis on Pseudocercospora spp. Fungal Syst Evol, 6, 95-127. doi:10.3114/fuse.2020.06.06
  • Alvarez, L. V., Hattori, Y., Deocaris, C. C., Mapanao, C. P., Bautista, A. B., Cano, M. J. B., . . . Nakashima, C. (2020). Colletotrichum asianum causes anthracnose in Philippine mango cv. Carabao. Australasian Plant Disease Notes, 15(1). https://doi.org/10.1007/s13314-020-00384-x
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